Is it better to just run them in during one long 100 mile run, or a few shorter runs?
Are you trying to wear away the outer layer of shiney rubber or is the idea to get a few heat cycles in to the tyres to chemically alter them?
I did a quick 2 mile shakedown run tonight after work, just to see if anything fell off the bike after all the work i have done lately. Every thing seems ok and hopefully everything is still attached to where it is supposed to be.

The old tyres that were fitted to the CBR were completely knackered and i can already feel an improvement in the bikes handling now that the new tyres have been fitted, it turns in so much quicker and feels a lot more stable. I have never ridden on tyres as badly squared off as the old tyres (although CMS's ER5 that i did my test on came very, very close) that were on the bike when i got it. I was blaming the CBR 's lack of handling on it being a big heavy old dinosaur compared to my FZR 400RR which is pretty well sorted with progressive springs, heavier fork oil and a 2007 R 6 fully adjustable rear shock and only weighs 160kg wet.
Hopefully i will get some time to get a few miles on the bike on Sunday, if the weather is half decent.